{"id":79056,"date":"2026-02-28T21:41:07","date_gmt":"2026-02-28T13:41:07","guid":{"rendered":"https:\/\/www.wsisp.com\/helps\/79056.html"},"modified":"2026-02-28T21:41:07","modified_gmt":"2026-02-28T13:41:07","slug":"r%e8%af%ad%e8%a8%80%e4%b8%ad%e5%a6%82%e4%bd%95%e8%ae%a1%e7%ae%97%e5%8a%9f%e8%83%bd%e5%a4%9a%e6%a0%b7%e6%80%a7%e6%8c%87%e6%95%b0%ef%bc%88%e5%90%ab%e6%95%b0%e6%8d%ae%e6%a0%bc%e5%bc%8f%e6%95%b4%e7%90%86","status":"publish","type":"post","link":"https:\/\/www.wsisp.com\/helps\/79056.html","title":{"rendered":"R\u8bed\u8a00\u4e2d\u5982\u4f55\u8ba1\u7b97\u529f\u80fd\u591a\u6837\u6027\u6307\u6570\uff08\u542b\u6570\u636e\u683c\u5f0f\u6574\u7406\uff09"},"content":{"rendered":"

\u4eca\u5929\u9047\u5230\u6709\u4eba\u54a8\u8be2FAD(Functional attribute diversity)\u5e94\u8be5\u600e\u4e48\u8ba1\u7b97，\u8bf4\u5728\u7f51\u4e0a\u67e5\u4e0d\u5230\u76f8\u5173\u8d44\u6599\u3002\u8fd9\u4e2a\u6307\u6570\u662fWalkeret et al.\u57281999\u5e74\u63d0\u51fa\u7684，\u5b83\u7684\u5b9a\u4e49\u4e5f\u975e\u5e38\u7b80\u5355： <\/p>\n

F<\/p>\n

A<\/p>\n

D<\/p>\n

=<\/p>\n

\u2211<\/p>\n

i<\/p>\n

S<\/p>\n

\u2211<\/p>\n

j<\/p>\n

S<\/p>\n

d<\/p>\n

i<\/p>\n

j<\/p>\n

FAD=\u2211_i^S\u2211_j^Sd_{ij } <\/p>\n

<\/span><\/span>F<\/span>A<\/span>D<\/span><\/span>=<\/span><\/span><\/span><\/span><\/span>i<\/span><\/span><\/span><\/span>\u2211<\/span><\/span><\/span><\/span>S<\/span><\/span><\/span><\/span>\u200b<\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span>j<\/span><\/span><\/span><\/span>\u2211<\/span><\/span><\/span><\/span>S<\/span><\/span><\/span><\/span>\u200b<\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span>d<\/span><\/span>ij<\/span><\/span><\/span><\/span><\/span>\u200b<\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span> \u5176\u4e2d<\/p>\n

d<\/p>\n

i<\/p>\n

j<\/p>\n

d_{ij }<\/p>\n

<\/span><\/span>d<\/span><\/span>ij<\/span><\/span><\/span><\/span><\/span>\u200b<\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span><\/span>\u662f\u7269\u79cd<\/p>\n

i<\/p>\n

i<\/p>\n

<\/span><\/span>i<\/span><\/span><\/span><\/span><\/span>\u4e0e\u7269\u79cd<\/p>\n

j<\/p>\n

j<\/p>\n

<\/span><\/span>j<\/span><\/span><\/span><\/span><\/span>\u4e4b\u95f4\u7684\u529f\u80fd\u8ddd\u79bb\u3002\u7b80\u5355\u6765\u8bf4FAD\u5c31\u662f\u6240\u6709\u7269\u79cd\u961f\u4e4b\u95f4\u529f\u80fd\u8ddd\u79bb\u7684\u603b\u548c\u3002<\/p>\n

\u5728R\u4e2d\u7684\u8ba1\u7b97\u4e5f\u5341\u5206\u7b80\u5355，sum(dist(data))\u5c31\u53ef\u4ee5\u76f4\u63a5\u5f97\u51fa\u7ed3\u679c\u3002 \u8fd9\u4e2a\u6307\u6807\u4e0d\u4f1a\u8bb2\u7269\u79cd\u591a\u5ea6\u8003\u8651\u8fdb\u6765，\u6240\u4ee5\u5df2\u7ecf\u4e0d\u600e\u4e48\u5355\u62ce\u51fa\u6765\u7528\u4e86\u3002<\/p>\n

\u4e0b\u9762\u7ed3\u5408\u5176\u4ed6\u7684\u529f\u80fd\u591a\u6837\u6027\u6307\u6570\u8bb2\u4e00\u8bb2\u5728R\u4e2d\u5982\u4f55\u8ba1\u7b97\u529f\u80fd\u591a\u6837\u6027\u6307\u6570\u4ee5\u53ca\u6570\u636e\u5e94\u8be5\u6574\u7406\u6210\u4ec0\u4e48\u6837\u7684\u683c\u5f0f\u3002<\/p>\n

\u9996\u5148\u662f\u6570\u636e\u7684\u6574\u7406，\u6211\u4eec\u9700\u8981\u4e24\u7ec4\u6570\u636e，\u4e00\u7ec4\u662f\u529f\u80fd\u6027\u72b6，\u4e00\u7ec4\u662f\u7fa4\u843d\u7269\u79cd\u591a\u5ea6\u6570\u636e\u3002 \u529f\u80fd\u6027\u72b6\u6574\u7406\u6210\u884c\u662f\u7269\u79cd，\u5217\u662f\u529f\u80fd\u6027\u72b6，\u6570\u503c\u4e3a\u539f\u59cb\u6d4b\u91cf\u503c\u7684\u683c\u5f0f<\/p>\n

\"\u5728\u8fd9\u91cc\u63d2\u5165\u56fe\u7247\u63cf\u8ff0\" \u7fa4\u843d\u6570\u636e\u6574\u7406\u6210\u884c\u662f\u6837\u65b9，\u5217\u662f\u7269\u79cd，\u6570\u503c\u4e3a\u591a\u5ea6\u7684\u683c\u5f0f\u3002<\/p>\n

\"\u5728\u8fd9\u91cc\u63d2\u5165\u56fe\u7247\u63cf\u8ff0\"<\/p>\n

\u968f\u540e\u5c06\u6570\u636e\u5bfc\u5165R\u4e2d<\/p>\n

com<-<\/span>read.csv(<\/span>"site-sp-abundance.csv"<\/span>,<\/span>header =<\/span> TRUE<\/span>,<\/span>row.names=<\/span>1<\/span>)<\/span><\/p>\n

trait<-<\/span>read.csv(<\/span>"trait.csv"<\/span>,<\/span>header =<\/span> TRUE<\/span>,<\/span>row.names =<\/span> 1<\/span>)<\/span><\/p>\n

FAD\u7684\u8ba1\u7b97\u4e3a：<\/p>\n

FAD<-<\/span>sum(<\/span>dist(<\/span>trait)<\/span>)<\/span><\/p>\n

\u5982\u679c\u6027\u72b6\u6570\u636e\u6709\u5206\u7c7b\u53d8\u91cf，\u4e00\u5b9a\u8981\u63d0\u524d\u7528\u6570\u503c\u4ee3\u66ff\u5206\u7c7b\u6307\u6807\u3002<\/p>\n

\u529f\u80fd\u591a\u6837\u6027\u7684\u8ba1\u7b97\u901a\u8fc7FD\u5305\u5b8c\u6210\u3002<\/p>\n

\u6211\u4eec\u4f7f\u7528FD\u5305\u4e2d\u7684dbFD\u51fd\u6570\u7ed3\u5408\u7269\u79cd\u7684\u591a\u5ea6\u8ba1\u7b97\u529f\u80fd\u591a\u6837\u6027\u4e30\u5bcc\u5ea6（Functional Richness, FRic），\u529f\u80fd\u591a\u6837\u6027\u5747\u5300\u5ea6（Functional Evenness,FEve）\u4ee5\u53ca\u529f\u80fd\u5206\u5f02\u5ea6（Functional Divergence,FDiv）\u4ee5\u53ca\u529f\u80fd\u79bb\u6563\u5ea6（Rao\u2019s Quadratic Entropy,RaoQ）\u3002<\/p>\n

\"dbFD\u51fd\u6570\u4ecb\u7ecd\"<\/p>\n

\u5728R\u4e2d\u8fd0\u884cdbFD\u51fd\u6570，\u5373\u53ef\u83b7\u5f97\u4ee5\u4e0a\u529f\u80fd\u591a\u6837\u6027\u6307\u6807<\/p>\n

library(<\/span>FD)<\/span>
\ndbfd_result <-<\/span> dbFD(<\/span>trait,<\/span>com)<\/span>
\nwrite.csv(<\/span>dbfd_result,<\/span>"dbfd_result.csv"<\/span>)<\/span><\/p>\n","protected":false},"excerpt":{"rendered":"

\u4eca\u5929\u9047\u5230\u6709\u4eba\u54a8\u8be2FAD(Functional attribute diversity)\u5e94\u8be5\u600e\u4e48\u8ba1\u7b97，\u8bf4\u5728\u7f51\u4e0a\u67e5\u4e0d\u5230\u76f8\u5173\u8d44\u6599\u3002\u8fd9\u4e2a\u6307\u6570\u662fWalkeret et al.\u57281999\u5e74\u63d0\u51fa\u7684，\u5b83\u7684\u5b9a\u4e49\u4e5f\u975e\u5e38\u7b80\u5355： FAD\u2211iS\u2211jSdijFAD\u2211_i^S\u2211_j^Sd_{ij } FADi\u2211S\u200bj\u2211S\u200bdij\u200b \u5176\u4e2ddijd_{ij }dij\u200b\u662f\u7269\u79cdiii\u4e0e\u7269\u79cdjjj\u4e4b\u95f4\u7684\u529f\u80fd\u8ddd\u79bb\u3002\u7b80\u5355\u6765\u8bf4FAD\u5c31\u662f\u6240\u6709\u7269\u79cd\u961f\u4e4b\u95f4\u529f\u80fd\u8ddd\u79bb\u7684\u603b\u548c\u3002
\n\u5728R\u4e2d\u7684\u8ba1<\/p>\n","protected":false},"author":2,"featured_media":79053,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[799,190],"topic":[],"class_list":["post-79056","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-server","tag-r","tag-190"],"yoast_head":"\nR\u8bed\u8a00\u4e2d\u5982\u4f55\u8ba1\u7b97\u529f\u80fd\u591a\u6837\u6027\u6307\u6570\uff08\u542b\u6570\u636e\u683c\u5f0f\u6574\u7406\uff09 - \u7f51\u7855\u4e92\u8054\u5e2e\u52a9\u4e2d\u5fc3<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.wsisp.com\/helps\/79056.html\" \/>\n<meta property=\"og:locale\" content=\"zh_CN\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"R\u8bed\u8a00\u4e2d\u5982\u4f55\u8ba1\u7b97\u529f\u80fd\u591a\u6837\u6027\u6307\u6570\uff08\u542b\u6570\u636e\u683c\u5f0f\u6574\u7406\uff09 - 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